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Research assistant toolkit

Ten research capabilities plus one shared support package, from ideation and literature discovery to review and revision.

Contents and workflow

11 skills
  1. 01

    nature-shared

    Nature shared references (dependency)

    Shared references for Nature reading, review and revision; not a standalone workflow.

    Example prompt
    Use this skill for my supplied research materials. Preserve source grounding and distinguish completed work from plans and assumptions.
  2. 02

    scientific-brainstorming

    Research brainstorming

    Explore research gaps and candidate directions without treating ideas as verified findings.

    Example prompt
    Use this skill for my supplied research materials. Preserve source grounding and distinguish completed work from plans and assumptions.
  3. 03

    literature-review

    Literature review

    Plan searches, screen sources, and synthesize evidence.

    Example prompt
    Use this skill for the corresponding stage of my research; identify missing inputs and evidence limitations.
  4. 04

    ljg-paper

    Paper close reading

    Analyze a paper’s question, method and contribution in structured notes.

    Example prompt
    Use this skill for the supplied task. Identify missing inputs, verify evidence, and state any configuration requirements before execution.
  5. 05

    nature-reader

    Bilingual full-paper reading

    Create source-grounded bilingual readers with aligned text, figures and equations.

    Example prompt
    Use this skill for my supplied research materials. Preserve source grounding and distinguish completed work from plans and assumptions.
  6. 06

    citation-management

    Citations

    Validate metadata, DOIs, and BibTeX citations.

    Example prompt
    Use this skill for the corresponding stage of my research; identify missing inputs and evidence limitations.
  7. 07

    statistical-analysis

    Statistical analysis

    Choose statistical methods, check assumptions, and interpret results.

    Example prompt
    Use this skill for the corresponding stage of my research; identify missing inputs and evidence limitations.
  8. 08

    scientific-visualization

    Scientific figures

    Create readable and reproducible scientific figures.

    Example prompt
    Use this skill for the corresponding stage of my research; identify missing inputs and evidence limitations.
  9. 09

    scientific-writing

    Scientific writing

    Structure manuscripts and review evidence and reporting requirements.

    Example prompt
    Use this skill for the corresponding stage of my research; identify missing inputs and evidence limitations.
  10. 10

    nature-reviewer

    Pre-submission mock review

    Assess significance, validity, evidence and presentation with prioritized concerns.

    Example prompt
    Use this skill for my supplied research materials. Preserve source grounding and distinguish completed work from plans and assumptions.
  11. 11

    nature-response

    Point-by-point response and revision

    Draft point-by-point responses, revision letters and consistent revision packages.

    Example prompt
    Use this skill for my supplied research materials. Preserve source grounding and distinguish completed work from plans and assumptions.

Usage guide

Workflow

Ten research capabilities plus the nature-shared dependency cover ideation, literature review, close reading, bilingual reading, citations, statistics, figures, writing, mock review and revision. Invoke members as needed; the pack does not run automatically.

Dependencies and scope

Install nature-shared first and keep all Nature directories at the same pinned commit. This installs skill files only. Configure runtimes, extraction/OCR, document tools and external services separately. Independent mock reviews require isolated contexts. Use only actual evidence and completed work in claims and responses.

Version 1.1.0

Preserves the original six pinned sources and adds brainstorming, bilingual reading, mock review, reviewer response and shared references. Historical recipes and installed content remain available.

Verification

Directory structure checked; the actual workflow has not been tested. Checked five added directories, manifests, complete references, shared dependencies, licenses and archive budgets. Original six sources remain pinned. Structural and automated installation checks do not constitute desktop research-workflow acceptance.